Publications

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2013:


Byrnes, L.J., Singh, A., Szeto, K., Benvin, N.M., O’Donnell, J.P., Zipfel, W.R., and
Sondermann, H. (2013). Structural basis for conformational switching and GTP loading of the large G protein atlastin. EMBO J (accepted).


2012:

Goh, S.L., Wang, Q., Byrnes, L.J., and
Sondermann, H. (2012). Versatile membrane deformation potential of activated pacsin. PLoS One 7(12): e51628.

Boyd, C.D., Chatterjee, D.,
Sondermann, H., and O’Toole, G.A. (2012). LapG, required for modulating biofilm formation by Pseudomonas fluorescens Pf0-1, is a calcium-dependent protease. J Bacteriol 194(16): 4406-4414.

Chatterjee, D., Boyd, C.D., O’Toole, G.A., and
Sondermann, H. (2012). Structural evidence for a conserved, calcium-dependent mechanism of the periplasmic DUF920-like protease LapG from Legionella pneumophila. J Bacteriol 194(16): 4415-4425.

Krasteva, P.V., Giglio, K.M., and
Sondermann, H. (2012). Sensing the messenger: The diverse ways that bacteria signal through c-di-GMP. Protein Sci 21(7): 929-948.

Rozovsky, S., Forstner, M.,
Sondermann, H., and Groves, J.T. (2012). Single molecule kinetics of ENTH binding to lipid membranes. J Phys Chem 116(17): 5122-5131.

Sondermann, H.*, Shikuma, N.J., and Yildiz, F.H.* (2012). You've come a long way: c-di-GMP signaling. Curr Opin Microbiol 15(2):140-146.
(*Co-corresponding authors.)



2011:


Wang, Q.#*, Byrnes, L.J.#, Shui, B.#, Röhrig, U.F.#, Singh, A., Chudakov, D.M., Lukyanov, S.A., Zipfel, W.R., Kotlikoff, M.I.*, and
Sondermann, H.* (2011). Molecular mechanism of a green-shifted variant of the red-fluoresent protein mKate. (accepted for publication in PLoS One).
(*Co-corresponding authors. #These authors contributed equally to this work.)

Forster, B., Bitar, A.P., Slepkov, E., Kota, K.,
Sondermann, H., and Marquis, H. (2011) The metalloprotease of Listeria monocytogenes is regulated by pH. (accepted for publication in J Bacteriol).

Shui, B, Wang, Q, Byrnes, L.J., Lee, F., Chudakov, D.M., Lukyanov, S.A.,
Sondermann,H., and Kotlikoff, M.I. (2011). Efficient circular permutation of red fluorescent proteins. PLoS One 6(5): e20505.

Navarro, M.V.A.S.*, Newell, P.D.*, Krasteva, P.V.*, Chatterjee, D.*, Madden, D.R., O’Toole, G.A., and
Sondermann, H. (2011). Structural basis for c-di-GMP-mediated inside-out signaling controlling periplasmic proteolysis. PLoS Biology 9(2): e1000588.
(*These authors contributed equally to this work.)

Newell, P.D., Boyd, C.,
Sondermann, H., and O’Toole, G.A. (2011). A c-di-GMP effector system controls cell adhesion by inside-out signaling and surface protein cleavage. PLoS Biology 9(2): e1000587.

Byrnes, L.J., and
Sondermann, H. (2011). Structural basis for the nucleotide-dependent dimerization of the large G protein atlastin-1/SPG3A. Proc Natl Acad Sci USA (Early Edition).


2010:


Krasteva, P.V., Fong, J.C.N., Shikuma, N.J., Beyhan, S., Navarro, M.V.A.S., Yildiz, F.H.*, and
Sondermann, H.* (2010). Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP. Science 327(5967): 866-868. [link]
(*Co-corresponding authors.)

Gureasko, J., Kuchment, O., Makino, D.,
Sondermann, H., Bar-Sagi, D. and Kuriyan, J. (2010). The role of the histone domain in the autoinhibition and activation of the Ras activator Son of Sevenless. Proc Natl Acad Sci USA 107(8): 3430-3435.


2009:


De, N., Navarro, M.V.A.S., Raghavan, R.V., and
Sondermann, H. (2009). Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR. J Mol Biol 393(3): 619-33.

Navarro, M.V.A.S.*, De, N.*, Bae, N., Wang, Q., and
Sondermann, H. (2009). Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX. Structure 17(8): 1104-1116.
(*These authors contributed equally to this work.)

Wang, Q., Navarro, M.V.A.S., Peng, G., Molinelli, E. , Judson, B.L., Rajashankar, K.R., and
Sondermann, H. (2009). Molecular mechanism of membrane constriction and tubulation mediated by the F-BAR protein Pacsin/Syndapin. Proc Natl Acad Sci USA 106(31): 12700-12705.

Ahmed, A.H., Thompson, M., Fenwick, M., Romero, B., Loh, A., Jane, D.,
Sondermann H., and Oswald, R.E. (2009). Mechanisms of antagonism of the GluR2 AMPA receptor: Structure and dynamics of the complex of two willardiine antagonists with the glutamate binding domain. Biochemistry 48(18) 3894-3903.

Freedman, T.S.,
Sondermann, H., Kuchment, O., Friedland, G.D., Kortemme, T., and Kuriyan, J. (2009). Differences in flexibility underlie functional differences in the Ras activators Son of sevenless and Ras Guanine Nucleotide Releasing Factor 1. Structure 17(1): 41-53.


2008:

Wang, Q., Shui, B., Kotlikoff, M.I., and
Sondermann, H. (2008). Structural basis for Calcium sensing by GCaMP2. Structure 16(12): 1817-1827.

Ahmed, A.H., Wang, Q.,
Sondermann H., and Oswald, R.E. (2008). Structure of the S1S2 glutamate binding domain of GluR3. Proteins 75(3): 628-637.

Wang, Q., Kaan, H.Y.K., Hooda, R.N., Goh, S.L., and
Sondermann, H. (2008). Structure and plasticity of Endophilin and Sorting Nexin 9. Structure, 16(10): 1574-1587.

Gureasko, J., Galush, W., Boykevisch, S.,
Sondermann, H., Bar-Sagi, D., Groves, J., and Kuriyan, J. (2008). Membrane-dependent signal integration of the Ras activator Son of Sevenless. Nature Structural and Molecular Biology, 15(5): 452-61.

De, N., Pirruccello, M., Krasteva, P.V., Bae, N., Raghavan, R.V., and
Sondermann, H. (2008). Phosphorylation-independent regulation of the diguanylate cyclase WspR. PLoS Biology, 6(3): e67.


2006:

Freedman, T.S.*,
Sondermann, H.*, Friedland, G., Kortemme, T., Bar-Sagi, D., Marqusee, S., and Kuriyan, J. (2006). A Ras-induced conformational switch in the Ras activator Son of sevenless. Proc Natl Acad Sci USA 103(45): 16692-16697.
(*These authors contributed equally to this work.)

Boykevisch, S., Zhao, C.,
Sondermann, H., Philippidou, P., Halegoua, S., Kuriyan, J., and Bar-Sagi, D. (2006). Regulation of Ras signaling dynamics by Sos-mediated positive feedback. Current Biology 16(21): 2173-2179.

Pirruccello, M.,
Sondermann, H., Pelton, J.G., Pellicena, P., Hoelz, A., Chernoff, J., Wemmer, D.E., and Kuriyan, J. (2006). A dimeric kinase assembly underlying autophosphorylation in the p21 Activated Kinases. J Mol Biol 361: 312-326.


2005:

Sondermann, H., Nagar, B., Bar-Sagi, D., and Kuriyan, J. (2005). Computational docking and X-ray scattering predict a membrane-interacting role for the histone domain of the Ras-activator Son of Sevenless. Proc Natl Acad Sci USA 102(46):16632-16637.

Sondermann, H., and Kuriyan, J. (2005). C2 can do it, too. Cell 121:158-160 (Preview).

Mao, X., Ren, Z., Parker, G.N.,
Sondermann, H. , Pastorello, M.A., Wang, W., McMurray, J.S., Demeler, B., Darnell, J.E.Jr., and Chen, X. (2005). Structural bases of unphosphorylated STAT1 association and receptor binding. Molecular Cell 17(6):761-771.

Sondermann, H.*, Zhao, C.*, and Bar-Sagi, D. (2005). Analysis of Ras:RasGEF Interactions by Phage Display and Static Multi Angle Light Scattering. Methods 37(2):197-202) .
(*These authors contributed equally to this work.)


2004:

Sondermann, H.*, Soisson, S.M.*, Boykevisch, S., Yang, S.-S., Bar-Sagi, D., and Kuriyan, J. (2004). Structural analysis of autoinhibition in the Ras activator Son of Sevenless. Cell 119(3):393-405.
(*These authors contributed equally to this work.) [Commentary]


2003:

Sondermann, H., Soisson, S.M., Bar-Sagi, D., and Kuriyan, J. (2003). Tandem histone folds in the structure of the N-terminal segment of the Ras activator Son of Sevenless. Structure 11(12):1583-1593.

Harkiolaki, M., Lewitzky, M., Jones, E.Y., Bourette, R., Mouchiroud, G.,
Sondermann, H., Moarefi, I. and Feller, S.M. (2003). Structural basis for SH3 domain-mediated high-affinity binding between Mona/Gads and SLP-76. EMBO J 22:2571-2582.

Margarit, S.M.,
Sondermann, H., Hall, B.E., Nagar, B., Hoelz, A., Pirruccello, M., Bar-Sagi, D. and Kuriyan, J. (2003). Structural evidence for feedback activation by Ras.GTP of the Ras-specific nucleotide exchange factor SOS. Cell 112(5):685-695.


2002:

Sondermann, H., Ho, A.K., Listenberger, L.L., Siegers, K., Moarefi, I., Wente, S.R., Hartl, F.U. and Young, J.C. (2002). Prediction of novel Bag-1 homologs based on structure/function analysis identifies Snl1p as an Hsp70 co-chaperone in S. cerevisiae . J Biol Chem 277(36):33220-33227.

El Mourabit, H., Poinat, P., Koster, J.,
Sondermann, H., Wixler, V., Wegener, E., Laplantine, E., Geerts, D., Georges-Labouesse, E., Sonnenberg, A. and Aumailley, M. (2002). The PDZ domain of TIP-2/GIPC interacts with the C-terminus of the integrin a 5 and a 6 subunits. Matrix Biol 21(2):207-214.


2001:

Sondermann, H., Scheufler, C., Schneider, C., Hohfeld, J., Hartl, F.U. and Moarefi, I. (2001). Structure of a Bag/Hsc70 complex: convergent functional evolution of Hsp70 nucleotide exchange factors. Science 291(5508):1553-7.


2000:

Sondermann, H., Becker, T., Mayhew, M., Wieland, F. and Hartl, F.U. (2000). Characterization of a receptor for heat shock protein 70 on macrophages and monocytes. Biol Chem 381(12):1165-74.


1999:

Sondermann, H., Dogic, D., Pesch, M. and Aumailley, M. (1999). Targeting of cytoskeletal linker proteins to focal adhesion complexes is reduced in fibroblasts adhering to laminin-1 when compared to fibronectin. Cell Adhes Commun 7(1):43-56.


1998:

Obermann, W.M.,
Sondermann, H., Russo, A.A., Pavletich, N.P. and Hartl, F.U. (1998). In vivo function of Hsp90 is dependent on ATP binding and ATP hydrolysis. J Cell Biol 143(4):901-10.



Last time edited: February 2, 2013